R/get_data_biotime.R
get_biotime_dataset_ids.Rd
Retrieve the dataset ids from processed BioTime files. If the
processed files do not exist, and do_processing == TRUE
, then we also
load the raw BioTime database and process the necessary datasets, too.
prepare_biotime_data
is a thin wrapper around
get_biotime_dataset_ids()
for processing BioTime dataset
get_biotime_dataset_ids( path = get_default_data_path(), data_subset = NULL, do_processing = FALSE, force_reprocessing = FALSE ) prepare_biotime_data(path = get_default_data_path(), data_subset = NULL)
path | where to get the downloaded retriever datasets |
---|---|
data_subset | optional, a subset of the Biotime study_ids to use (to speed up development). As c(1:X) |
do_processing | whether to process the datasets if necessary |
force_reprocessing | whether to force re-processing of datasets |
vector of dataset ids in the processed set of files
vector of dataset ids in the processed set of files
if (FALSE) { get_biotime_dataset_ids() } if (FALSE) { prepare_biotime_data() }