Skip to contents

Create a List of Full Directory Paths

Source: R/directory.R
directory-paths.Rd

Upon creation (or updating) of the directory, all the standard file and subdirectory paths are set based on directory_settings.
paths produces the full path list, whose contents can then also be accessed with specialized functions, see Details.
There is also a special function for the shiny application location, which could either be referencing the file or folder.

Usage

paths(main = ".")

models_rmd_path(main = ".")

models_html_path(main = ".")

about_md_path(main = ".")

rodents_profiles_html_path(main = ".")

rodents_profiles_csv_path(main = ".")

rodents_datasets_controls_path(main = ".")

models_controls_path(main = ".")

rodents_dataset_path(main = ".", dataset = "all")

species_names_path(main = ".")

climate_forecasts_paths(main = ".")

forecasts_metadata_path(main = ".")

forecasts_evaluations_path(main = ".")

forecasts_results_path(main = ".")

newmoons_path(main = ".")

covariates_path(main = ".")

metadata_path(main = ".")

www_path(main = ".")

app_paths(main = ".")

data_path(main = ".")

forecasts_path(main = ".")

fits_path(main = ".")

models_path(main = ".")

resources_path(main = ".")

Arguments

main

character value of the name of the main component of the directory tree.

dataset

character value of name of rodent dataset.

Value

list of directory paths or specific character paths.

Details

Wrapper functions for specific subdirectories and files include:

  • Files

    • rodents_dataset_path

    • species_names_path

    • climate_forecasts_paths

    • forecasts_metadata_path

    • forecasts_evaluations_path

    • forecasts_results_path

    • newmoons_path

    • covariates_path

    • metadata_path

    • models_controls_path

    • models_rmd_path

    • rodents_profiles_html_path

    • rodents_profiles_csv_path

  • Subdirectories

    • www_path

    • data_path

    • forecasts_path

    • fits_path

    • models_path

  • Shiny Application

    • app_paths

See also

Directory orchestration functions: directory configuration file, directory creation, directory filling, directory settings

Examples

if (FALSE) { # \dontrun{
   main1 <- file.path(tempdir(), "standard")
   create_dir(main = main1)

   paths(main = main1)

   newmoons_path(main = main1)

   species_names_path(main = main1)
   rodents_dataset_path(main = main1)
   rodents_datasets_paths(main = main1)

   covariates_path(main = main1)
   climate_forecasts_paths(main = main1)

   metadata_path(main = main1)

   forecasts_metadata_path(main = main1)
   forecasts_evaluations_path(main = main1)
   forecasts_results_path(main = main1)

   models_controls_path(main = main1)

   models_rmd_path(main = main1)
   models_html_path(main = main1)
   about_md_path(main = main1)
   rodents_profiles_html_path(main = main1)
   rodents_profiles_csv_path(main = main1)

   app_paths(main = main1)

   www_path(main = main1)
   data_path(main = main1)
   forecasts_path(main = main1)
   fits_path(main = main1)
   models_path(main = main1)
   resources_path(main = main1)
} # }