All functions

add_seasons() yearly()

Add Seasons

bait_presence_absence()

Ant Bait Presence Absence

check_for_newer_data()

Check for latest version of data files

clean_plant_data()

Do basic cleaning of Portal plant data

clean_rodent_data()

Do basic cleaning of Portal rodent data

colony_presence_absence()

Ant Colony Presence Absence

download_observations()

Download the PortalData repo

fcast_ndvi()

Forecast ndvi using a seasonal auto ARIMA

fill_missing_ndvi()

Fill in historic ndvi data to the complete timeseries being fit

find_incomplete_censuses()

Period code for incomplete censuses

get_data_versions()

get version and download info for PortalData

get_future_moons()

Get future moon dates

load_datafile()

read in a raw datafile from the downloaded data or the GitHub repo

load_rodent_data() load_plant_data() load_ant_data() load_trapping_data()

Read in the Portal data files

make_timeseries()

Makes a standardized monthly time series for Portal rodents

ndvi()

NDVI by calendar month or lunar month

portalr

Creates summaries of the Portal data

shrub_cover()

Generate percent cover from Portal plant transect data

summarize_individual_rodents() summarise_individual_rodents()

Return cleaned Portal rodent individual data

summarize_plant_data() plant_abundance() summarise_plant_data()

Generate summaries of Portal plant data

summarize_rodent_data() abundance() biomass() energy() summarise_rodent_data()

Generate summaries of Portal rodent data

weather()

Weather by day, calendar month, or lunar month